Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP4BP1P59074 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 AL390754.1-201ENST00000619088 582 ntBASIC18.79■□□□□ 0.6
CHMP4BP1P59074 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 AC008677.1-201ENST00000519230 1561 ntBASIC18.79■□□□□ 0.6
CHMP4BP1P59074 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP4BP1P59074 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC093525.9-201ENST00000624961 1746 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 EGFEM1P-202ENST00000431685 1563 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 TREML5P-201ENST00000421694 576 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC107890.1-201ENST00000422478 521 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 BASP1P1-201ENST00000430708 665 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 GPS2P2-201ENST00000430745 888 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC055876.3-201ENST00000431496 288 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 SLC25A39P2-201ENST00000537614 270 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC026150.2-201ENST00000564693 1156 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 AC138649.4-201ENST00000612222 287 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 MIR6080-201ENST00000617359 66 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 FO538757.1-201ENST00000623083 1397 ntBASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP4BP1P59074 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 PCDHB17P-201ENST00000539533 2393 ntBASIC18.77■□□□□ 0.6
CHMP4BP1P59074 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 SLC22A20-204ENST00000530038 1673 ntBASIC18.77■□□□□ 0.6
CHMP4BP1P59074 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.77■□□□□ 0.6
CHMP4BP1P59074 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms