Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.1■□□□□ 0.01
CLDN20P56880 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLDN20P56880 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLDN20P56880 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN20P56880 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CLDN20P56880 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN20P56880 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN20P56880 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN20P56880 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN20P56880 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.09■□□□□ 0.01
CLDN20P56880 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN20P56880 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.09■□□□□ 0.01
CLDN20P56880 MIR4469-201ENST00000583919 79 ntBASIC15.09■□□□□ 0.01
CLDN20P56880 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.09■□□□□ 0.01
CLDN20P56880 AP001350.2-201ENST00000625104 1094 ntBASIC15.09■□□□□ 0.01
CLDN20P56880 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLDN20P56880 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.09■□□□□ 0.01
CLDN20P56880 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 AC006277.1-201ENST00000624348 1610 ntBASIC15.09■□□□□ 0.01
CLDN20P56880 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLDN20P56880 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.08■□□□□ 0.01
CLDN20P56880 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CLDN20P56880 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CLDN20P56880 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLDN20P56880 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.08■□□□□ 0
CLDN20P56880 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLDN20P56880 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 AL671710.1-201ENST00000610245 2349 ntBASIC15.08■□□□□ 0
CLDN20P56880 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
CLDN20P56880 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.08■□□□□ 0
CLDN20P56880 MKNK2P1-201ENST00000437526 628 ntBASIC15.08■□□□□ 0
CLDN20P56880 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.08■□□□□ 0
CLDN20P56880 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.08■□□□□ 0
CLDN20P56880 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.08■□□□□ 0
CLDN20P56880 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.08■□□□□ 0
CLDN20P56880 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 AC092902.6-201ENST00000641783 218 ntBASIC15.08■□□□□ 0
CLDN20P56880 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.08■□□□□ 0
CLDN20P56880 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.08■□□□□ 0
CLDN20P56880 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLDN20P56880 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms