Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 AC025678.2-201ENST00000562061 970 ntBASIC12.22□□□□□ -0.45
CMC4P56277 LINC01225-203ENST00000563550 1244 ntBASIC12.22□□□□□ -0.45
CMC4P56277 AP000842.3-202ENST00000569238 1080 ntBASIC12.22□□□□□ -0.45
CMC4P56277 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.22□□□□□ -0.45
CMC4P56277 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.22□□□□□ -0.45
CMC4P56277 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 AC006538.3-201ENST00000612495 578 ntBASIC12.22□□□□□ -0.45
CMC4P56277 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.22□□□□□ -0.45
CMC4P56277 AC139530.3-201ENST00000620344 690 ntBASIC12.22□□□□□ -0.45
CMC4P56277 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CMC4P56277 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
CMC4P56277 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.22□□□□□ -0.45
CMC4P56277 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CMC4P56277 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 AC106886.4-201ENST00000623557 2502 ntBASIC12.21□□□□□ -0.45
CMC4P56277 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.21□□□□□ -0.45
CMC4P56277 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 FAM220BP-201ENST00000377689 816 ntBASIC12.21□□□□□ -0.45
CMC4P56277 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CMC4P56277 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.21□□□□□ -0.45
CMC4P56277 AC023141.5-201ENST00000458585 616 ntBASIC12.21□□□□□ -0.45
CMC4P56277 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 AC069335.1-201ENST00000489972 472 ntBASIC12.21□□□□□ -0.45
CMC4P56277 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.21□□□□□ -0.45
CMC4P56277 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
CMC4P56277 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.21□□□□□ -0.45
CMC4P56277 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CMC4P56277 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.21□□□□□ -0.45
CMC4P56277 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CMC4P56277 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC12.21□□□□□ -0.46
CMC4P56277 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
CMC4P56277 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.21□□□□□ -0.46
CMC4P56277 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.21□□□□□ -0.46
CMC4P56277 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CMC4P56277 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
CMC4P56277 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC12.21□□□□□ -0.46
CMC4P56277 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CMC4P56277 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.46
CMC4P56277 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
CMC4P56277 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CMC4P56277 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.2□□□□□ -0.46
CMC4P56277 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CMC4P56277 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms