Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LBX1P52954 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.18■□□□□ 0.5
LBX1P52954 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
LBX1P52954 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
LBX1P52954 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LBX1P52954 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LBX1P52954 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC18.18■□□□□ 0.5
LBX1P52954 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.18■□□□□ 0.5
LBX1P52954 AC074338.1-201ENST00000416825 156 ntBASIC18.18■□□□□ 0.5
LBX1P52954 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.18■□□□□ 0.5
LBX1P52954 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
LBX1P52954 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.18■□□□□ 0.5
LBX1P52954 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.18■□□□□ 0.5
LBX1P52954 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC18.18■□□□□ 0.5
LBX1P52954 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LBX1P52954 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LBX1P52954 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LBX1P52954 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LBX1P52954 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LBX1P52954 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.17■□□□□ 0.5
LBX1P52954 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.17■□□□□ 0.5
LBX1P52954 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC18.17■□□□□ 0.5
LBX1P52954 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.17■□□□□ 0.5
LBX1P52954 AC022217.1-201ENST00000521069 738 ntBASIC18.17■□□□□ 0.5
LBX1P52954 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LBX1P52954 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.17■□□□□ 0.5
LBX1P52954 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LBX1P52954 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC18.17■□□□□ 0.5
LBX1P52954 AC087045.2-201ENST00000606279 1003 ntBASIC18.17■□□□□ 0.5
LBX1P52954 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC18.17■□□□□ 0.5
LBX1P52954 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.17■□□□□ 0.5
LBX1P52954 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.17■□□□□ 0.5
LBX1P52954 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.17■□□□□ 0.5
LBX1P52954 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LBX1P52954 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 KRT8P39-201ENST00000396270 1433 ntBASIC18.16■□□□□ 0.5
LBX1P52954 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.16■□□□□ 0.5
LBX1P52954 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
LBX1P52954 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 AL512430.1-201ENST00000392575 860 ntBASIC18.16■□□□□ 0.5
LBX1P52954 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.16■□□□□ 0.5
LBX1P52954 AL157792.1-201ENST00000488281 530 ntBASIC18.16■□□□□ 0.5
LBX1P52954 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LBX1P52954 AC019193.1-201ENST00000506678 823 ntBASIC18.16■□□□□ 0.5
LBX1P52954 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.16■□□□□ 0.5
LBX1P52954 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC18.16■□□□□ 0.5
LBX1P52954 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.16■□□□□ 0.5
LBX1P52954 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.16■□□□□ 0.5
LBX1P52954 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC18.16■□□□□ 0.5
LBX1P52954 AL645939.5-201ENST00000606834 243 ntBASIC18.16■□□□□ 0.5
LBX1P52954 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 AC116562.4-201ENST00000641316 2276 ntBASIC18.16■□□□□ 0.5
LBX1P52954 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LBX1P52954 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LBX1P52954 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LBX1P52954 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
LBX1P52954 AL138709.1-201ENST00000614840 1693 ntBASIC18.15■□□□□ 0.5
LBX1P52954 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LBX1P52954 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.15■□□□□ 0.5
LBX1P52954 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms