Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 LINC02012-201ENST00000608206 1725 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 FAM86MP-201ENST00000340703 885 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.2□□□□□ -0.14
HCFC1P51610 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HCFC1P51610 DOC2GP-202ENST00000514950 1163 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 AC123567.1-201ENST00000548294 1261 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
HCFC1P51610 CTBP2P3-201ENST00000585629 1255 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
HCFC1P51610 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.2□□□□□ -0.14
HCFC1P51610 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HCFC1P51610 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HCFC1P51610 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HCFC1P51610 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.19□□□□□ -0.14
HCFC1P51610 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
HCFC1P51610 ELK1P1-201ENST00000485699 580 ntBASIC14.19□□□□□ -0.14
HCFC1P51610 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.19□□□□□ -0.14
HCFC1P51610 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 AC092053.1-201ENST00000605787 1936 ntBASIC14.19□□□□□ -0.14
HCFC1P51610 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 UBALD1-205ENST00000590891 2641 ntBASIC14.19□□□□□ -0.14
HCFC1P51610 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.19□□□□□ -0.14
HCFC1P51610 GGT4P-201ENST00000623672 1708 ntBASIC14.19□□□□□ -0.14
HCFC1P51610 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HCFC1P51610 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.19□□□□□ -0.14
HCFC1P51610 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.19□□□□□ -0.14
HCFC1P51610 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HCFC1P51610 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HCFC1P51610 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.19□□□□□ -0.14
HCFC1P51610 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HCFC1P51610 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.19□□□□□ -0.14
HCFC1P51610 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.19□□□□□ -0.14
HCFC1P51610 RRP7BP-205ENST00000566851 833 ntBASIC14.19□□□□□ -0.14
HCFC1P51610 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.19□□□□□ -0.14
HCFC1P51610 AC010319.3-201ENST00000597028 470 ntBASIC14.19□□□□□ -0.14
HCFC1P51610 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
HCFC1P51610 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.19□□□□□ -0.14
HCFC1P51610 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.18□□□□□ -0.14
HCFC1P51610 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HCFC1P51610 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.18□□□□□ -0.14
HCFC1P51610 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms