Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MRE11P49959 CICP24-201ENST00000605464 2705 ntBASIC19.22■□□□□ 0.67
MRE11P49959 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.22■□□□□ 0.67
MRE11P49959 AC096633.1-201ENST00000422446 749 ntBASIC19.22■□□□□ 0.67
MRE11P49959 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.22■□□□□ 0.67
MRE11P49959 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.22■□□□□ 0.67
MRE11P49959 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.22■□□□□ 0.67
MRE11P49959 AC092364.2-202ENST00000597012 1073 ntBASIC19.22■□□□□ 0.67
MRE11P49959 AL773604.1-201ENST00000617417 272 ntBASIC19.22■□□□□ 0.67
MRE11P49959 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
MRE11P49959 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.22■□□□□ 0.67
MRE11P49959 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC19.22■□□□□ 0.67
MRE11P49959 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRE11P49959 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC19.21■□□□□ 0.67
MRE11P49959 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRE11P49959 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MRE11P49959 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
MRE11P49959 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.21■□□□□ 0.67
MRE11P49959 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.21■□□□□ 0.67
MRE11P49959 ACE-204ENST00000428043 5120 ntTSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC19.21■□□□□ 0.67
MRE11P49959 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.21■□□□□ 0.67
MRE11P49959 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.21■□□□□ 0.67
MRE11P49959 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.21■□□□□ 0.67
MRE11P49959 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRE11P49959 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRE11P49959 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MRE11P49959 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MRE11P49959 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 AL035633.1-201ENST00000406139 838 ntBASIC19.2■□□□□ 0.66
MRE11P49959 UPF3AP3-201ENST00000420996 769 ntBASIC19.2■□□□□ 0.66
MRE11P49959 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.2■□□□□ 0.66
MRE11P49959 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MRE11P49959 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.2■□□□□ 0.66
MRE11P49959 AC092597.1-201ENST00000487352 616 ntBASIC19.2■□□□□ 0.66
MRE11P49959 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.2■□□□□ 0.66
MRE11P49959 SART3-203ENST00000546611 1184 ntBASIC19.2■□□□□ 0.66
MRE11P49959 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.2■□□□□ 0.66
MRE11P49959 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.2■□□□□ 0.66
MRE11P49959 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
MRE11P49959 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms