Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 AC007389.4-201ENST00000454674 793 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 PTK7-212ENST00000476760 902 ntTSL 2 BASIC20.59■□□□□ 0.89
COL15A1P39059 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.59■□□□□ 0.89
COL15A1P39059 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.59■□□□□ 0.89
COL15A1P39059 AC008735.3-201ENST00000596646 500 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
COL15A1P39059 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
COL15A1P39059 AL033527.4-201ENST00000641026 673 ntBASIC20.59■□□□□ 0.89
COL15A1P39059 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL15A1P39059 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL15A1P39059 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL15A1P39059 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.58■□□□□ 0.89
COL15A1P39059 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL15A1P39059 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
COL15A1P39059 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
COL15A1P39059 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL15A1P39059 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
COL15A1P39059 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
COL15A1P39059 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
COL15A1P39059 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL15A1P39059 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
COL15A1P39059 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL15A1P39059 HIST1H2BPS3-201ENST00000419683 341 ntBASIC20.58■□□□□ 0.88
COL15A1P39059 HIST3H2BA-201ENST00000436555 524 ntBASIC20.58■□□□□ 0.88
COL15A1P39059 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC20.58■□□□□ 0.88
COL15A1P39059 AC234783.1-201ENST00000441761 496 ntBASIC20.58■□□□□ 0.88
COL15A1P39059 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.58■□□□□ 0.88
COL15A1P39059 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL15A1P39059 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.58■□□□□ 0.88
COL15A1P39059 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
COL15A1P39059 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
COL15A1P39059 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COL15A1P39059 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
COL15A1P39059 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
COL15A1P39059 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.57■□□□□ 0.88
COL15A1P39059 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.57■□□□□ 0.88
COL15A1P39059 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.57■□□□□ 0.88
COL15A1P39059 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC20.57■□□□□ 0.88
COL15A1P39059 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.57■□□□□ 0.88
COL15A1P39059 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COL15A1P39059 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
COL15A1P39059 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL15A1P39059 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.56■□□□□ 0.88
COL15A1P39059 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
COL15A1P39059 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 CYP4F24P-201ENST00000586049 1580 ntBASIC20.56■□□□□ 0.88
COL15A1P39059 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
COL15A1P39059 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.56■□□□□ 0.88
COL15A1P39059 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.56■□□□□ 0.88
COL15A1P39059 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.56■□□□□ 0.88
COL15A1P39059 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.56■□□□□ 0.88
COL15A1P39059 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC20.56■□□□□ 0.88
COL15A1P39059 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.56■□□□□ 0.88
COL15A1P39059 TMEM261P1-201ENST00000604899 340 ntBASIC20.56■□□□□ 0.88
COL15A1P39059 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COL15A1P39059 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 AL136982.4-201ENST00000437689 1740 ntBASIC20.55■□□□□ 0.88
COL15A1P39059 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
COL15A1P39059 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms