Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.34■□□□□ 0.37
RFC1P35251 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.34■□□□□ 0.37
RFC1P35251 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFC1P35251 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.34■□□□□ 0.37
RFC1P35251 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.34■□□□□ 0.37
RFC1P35251 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFC1P35251 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFC1P35251 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RFC1P35251 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RFC1P35251 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFC1P35251 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFC1P35251 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFC1P35251 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.33■□□□□ 0.37
RFC1P35251 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 REXO1L8P-201ENST00000604378 1897 ntBASIC17.33■□□□□ 0.37
RFC1P35251 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.33■□□□□ 0.37
RFC1P35251 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RFC1P35251 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.33■□□□□ 0.37
RFC1P35251 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RFC1P35251 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RFC1P35251 PCDHA1-201ENST00000378133 2726 ntBASIC17.33■□□□□ 0.36
RFC1P35251 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.33■□□□□ 0.36
RFC1P35251 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC1P35251 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RFC1P35251 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.33■□□□□ 0.36
RFC1P35251 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RFC1P35251 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RFC1P35251 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RFC1P35251 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC1P35251 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC1P35251 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.33■□□□□ 0.36
RFC1P35251 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.33■□□□□ 0.36
RFC1P35251 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RFC1P35251 LINC02199-201ENST00000506655 2702 ntBASIC17.33■□□□□ 0.36
RFC1P35251 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.33■□□□□ 0.36
RFC1P35251 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.32■□□□□ 0.36
RFC1P35251 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RFC1P35251 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RFC1P35251 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC1P35251 AL596087.1-201ENST00000400979 1969 ntBASIC17.32■□□□□ 0.36
RFC1P35251 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RFC1P35251 MIR574-201ENST00000385209 96 ntBASIC17.32■□□□□ 0.36
RFC1P35251 AL022342.1-201ENST00000400363 863 ntBASIC17.32■□□□□ 0.36
RFC1P35251 MIR940-201ENST00000401276 94 ntBASIC17.32■□□□□ 0.36
RFC1P35251 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC1P35251 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 AP002472.1-201ENST00000577490 586 ntBASIC17.32■□□□□ 0.36
RFC1P35251 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.32■□□□□ 0.36
RFC1P35251 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.32■□□□□ 0.36
RFC1P35251 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 AC005622.1-201ENST00000636801 1703 ntBASIC17.32■□□□□ 0.36
RFC1P35251 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RFC1P35251 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.32■□□□□ 0.36
RFC1P35251 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RFC1P35251 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.31■□□□□ 0.36
RFC1P35251 AC006449.6-201ENST00000612330 2296 ntBASIC17.31■□□□□ 0.36
RFC1P35251 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RFC1P35251 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RFC1P35251 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms