Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC011495.1-201ENST00000498085 584 ntBASIC18.64■□□□□ 0.57
CNGA1P29973 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CNGA1P29973 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.64■□□□□ 0.57
CNGA1P29973 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.64■□□□□ 0.57
CNGA1P29973 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNGA1P29973 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CNGA1P29973 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.64■□□□□ 0.57
CNGA1P29973 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.64■□□□□ 0.57
CNGA1P29973 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNGA1P29973 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.63■□□□□ 0.57
CNGA1P29973 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.63■□□□□ 0.57
CNGA1P29973 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CNGA1P29973 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.63■□□□□ 0.57
CNGA1P29973 AL079307.3-201ENST00000556114 283 ntBASIC18.63■□□□□ 0.57
CNGA1P29973 AC008494.3-201ENST00000606615 944 ntBASIC18.63■□□□□ 0.57
CNGA1P29973 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.63■□□□□ 0.57
CNGA1P29973 AC009053.2-201ENST00000563701 2365 ntBASIC18.63■□□□□ 0.57
CNGA1P29973 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CNGA1P29973 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CNGA1P29973 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CNGA1P29973 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CNGA1P29973 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.63■□□□□ 0.57
CNGA1P29973 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.62■□□□□ 0.57
CNGA1P29973 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.62■□□□□ 0.57
CNGA1P29973 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CNGA1P29973 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNGA1P29973 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.62■□□□□ 0.57
CNGA1P29973 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.62■□□□□ 0.57
CNGA1P29973 AC098859.1-201ENST00000502915 1238 ntBASIC18.62■□□□□ 0.57
CNGA1P29973 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CNGA1P29973 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.62■□□□□ 0.57
CNGA1P29973 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.62■□□□□ 0.57
CNGA1P29973 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CNGA1P29973 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CNGA1P29973 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CNGA1P29973 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNGA1P29973 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CNGA1P29973 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA1P29973 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CNGA1P29973 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA1P29973 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA1P29973 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA1P29973 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.61■□□□□ 0.57
CNGA1P29973 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA1P29973 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNGA1P29973 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC18.61■□□□□ 0.57
CNGA1P29973 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.61■□□□□ 0.57
CNGA1P29973 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA1P29973 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.61■□□□□ 0.57
CNGA1P29973 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.61■□□□□ 0.57
CNGA1P29973 DOC2GP-202ENST00000514950 1163 ntBASIC18.61■□□□□ 0.57
CNGA1P29973 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.61■□□□□ 0.57
CNGA1P29973 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CNGA1P29973 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.61■□□□□ 0.57
CNGA1P29973 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms