Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XPAP23025 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
XPAP23025 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.57■□□□□ 0.24
XPAP23025 FAM58DP-201ENST00000428076 619 ntBASIC16.57■□□□□ 0.24
XPAP23025 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.57■□□□□ 0.24
XPAP23025 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.57■□□□□ 0.24
XPAP23025 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.57■□□□□ 0.24
XPAP23025 HLA-J-203ENST00000494367 1087 ntBASIC16.57■□□□□ 0.24
XPAP23025 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.57■□□□□ 0.24
XPAP23025 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.57■□□□□ 0.24
XPAP23025 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.57■□□□□ 0.24
XPAP23025 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.57■□□□□ 0.24
XPAP23025 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
XPAP23025 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.57■□□□□ 0.24
XPAP23025 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
XPAP23025 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.57■□□□□ 0.24
XPAP23025 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
XPAP23025 MIR600HG-201ENST00000449175 5984 ntBASIC16.57■□□□□ 0.24
XPAP23025 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC16.57■□□□□ 0.24
XPAP23025 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.57■□□□□ 0.24
XPAP23025 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
XPAP23025 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
XPAP23025 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 AC073439.1-201ENST00000624121 1774 ntBASIC16.56■□□□□ 0.24
XPAP23025 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.56■□□□□ 0.24
XPAP23025 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 AC106886.4-201ENST00000623557 2502 ntBASIC16.56■□□□□ 0.24
XPAP23025 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
XPAP23025 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.56■□□□□ 0.24
XPAP23025 AL139400.1-201ENST00000366220 510 ntBASIC16.56■□□□□ 0.24
XPAP23025 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.56■□□□□ 0.24
XPAP23025 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 FAM86GP-201ENST00000448322 971 ntBASIC16.56■□□□□ 0.24
XPAP23025 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.56■□□□□ 0.24
XPAP23025 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 AC106028.4-201ENST00000614509 607 ntBASIC16.56■□□□□ 0.24
XPAP23025 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.56■□□□□ 0.24
XPAP23025 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 HLA-A-202ENST00000376806 1854 ntBASIC16.56■□□□□ 0.24
XPAP23025 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 PCGF3-213ENST00000620529 1899 ntBASIC16.56■□□□□ 0.24
XPAP23025 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
XPAP23025 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
XPAP23025 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
XPAP23025 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
XPAP23025 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 UBALD1-205ENST00000590891 2641 ntBASIC16.55■□□□□ 0.24
XPAP23025 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 AC022211.2-201ENST00000585075 2527 ntBASIC16.55■□□□□ 0.24
XPAP23025 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.55■□□□□ 0.24
XPAP23025 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.55■□□□□ 0.24
XPAP23025 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
XPAP23025 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.55■□□□□ 0.24
XPAP23025 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.55■□□□□ 0.24
XPAP23025 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.55■□□□□ 0.24
XPAP23025 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 AC109322.1-201ENST00000524499 1264 ntBASIC16.55■□□□□ 0.24
XPAP23025 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
XPAP23025 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
XPAP23025 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.55■□□□□ 0.24
XPAP23025 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
XPAP23025 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms