Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BCKDHBP21953 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BCKDHBP21953 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.1■□□□□ 0.17
BCKDHBP21953 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.1■□□□□ 0.17
BCKDHBP21953 MIR4525-201ENST00000580000 75 ntBASIC16.1■□□□□ 0.17
BCKDHBP21953 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.1■□□□□ 0.17
BCKDHBP21953 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
BCKDHBP21953 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BCKDHBP21953 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.1■□□□□ 0.17
BCKDHBP21953 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BCKDHBP21953 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.09■□□□□ 0.17
BCKDHBP21953 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.09■□□□□ 0.17
BCKDHBP21953 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 GGT4P-201ENST00000623672 1708 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 PP12613-201ENST00000424958 2230 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BCKDHBP21953 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 HIST3H2BA-201ENST00000436555 524 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.09■□□□□ 0.17
BCKDHBP21953 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.09■□□□□ 0.17
BCKDHBP21953 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.09■□□□□ 0.17
BCKDHBP21953 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.09■□□□□ 0.17
BCKDHBP21953 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.09■□□□□ 0.17
BCKDHBP21953 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 TIMM17BP1-201ENST00000545713 516 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 RRP7BP-205ENST00000566851 833 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.09■□□□□ 0.17
BCKDHBP21953 AC010319.3-201ENST00000597028 470 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 RPSAP52-203ENST00000622976 1023 ntBASIC16.09■□□□□ 0.17
BCKDHBP21953 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
BCKDHBP21953 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
BCKDHBP21953 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
BCKDHBP21953 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
BCKDHBP21953 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
BCKDHBP21953 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BCKDHBP21953 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
BCKDHBP21953 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
BCKDHBP21953 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.08■□□□□ 0.16
BCKDHBP21953 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
BCKDHBP21953 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.08■□□□□ 0.16
BCKDHBP21953 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
BCKDHBP21953 AC245100.3-201ENST00000441281 285 ntBASIC16.08■□□□□ 0.16
BCKDHBP21953 AC104989.1-201ENST00000519711 778 ntBASIC16.08■□□□□ 0.16
BCKDHBP21953 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.08■□□□□ 0.16
BCKDHBP21953 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.08■□□□□ 0.16
BCKDHBP21953 RARRES2P5-201ENST00000564013 466 ntBASIC16.08■□□□□ 0.16
BCKDHBP21953 MIR4538-201ENST00000581377 78 ntBASIC16.08■□□□□ 0.16
BCKDHBP21953 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
BCKDHBP21953 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
BCKDHBP21953 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.08■□□□□ 0.16
BCKDHBP21953 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
BCKDHBP21953 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.08■□□□□ 0.16
BCKDHBP21953 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms