Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.82□□□□□ -0.2
CXCL3P19876 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.82□□□□□ -0.2
CXCL3P19876 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CXCL3P19876 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CXCL3P19876 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CXCL3P19876 KRT8P49-201ENST00000604166 1432 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 AC004817.3-201ENST00000602957 2129 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL3P19876 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL3P19876 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 CCR12P-201ENST00000446203 998 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 RBM17P1-201ENST00000453646 1190 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.81□□□□□ -0.2
CXCL3P19876 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.81□□□□□ -0.2
CXCL3P19876 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 AC073912.3-201ENST00000624414 853 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.81□□□□□ -0.2
CXCL3P19876 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 AGAP7P-201ENST00000582299 2062 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 AGAP14-201ENST00000624701 2060 ntBASIC13.81□□□□□ -0.2
CXCL3P19876 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CXCL3P19876 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CXCL3P19876 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CXCL3P19876 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 CICP20-201ENST00000443330 2801 ntBASIC13.8□□□□□ -0.2
CXCL3P19876 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL3P19876 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.8□□□□□ -0.2
CXCL3P19876 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL3P19876 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CXCL3P19876 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CXCL3P19876 MIR718-201ENST00000390190 70 ntBASIC13.8□□□□□ -0.2
CXCL3P19876 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms