Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.54■□□□□ 0.24
THRAP10827 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
THRAP10827 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 AC254562.1-201ENST00000417586 456 ntBASIC16.54■□□□□ 0.24
THRAP10827 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
THRAP10827 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 SNHG9-202ENST00000564014 471 ntBASIC16.54■□□□□ 0.24
THRAP10827 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 ELL2P1-201ENST00000413990 1906 ntBASIC16.54■□□□□ 0.24
THRAP10827 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
THRAP10827 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
THRAP10827 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.54■□□□□ 0.24
THRAP10827 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
THRAP10827 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
THRAP10827 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
THRAP10827 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.53■□□□□ 0.24
THRAP10827 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 MTHFR-217ENST00000641820 1569 ntBASIC16.53■□□□□ 0.24
THRAP10827 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 AL645728.1-201ENST00000366221 2101 ntBASIC16.53■□□□□ 0.24
THRAP10827 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.53■□□□□ 0.24
THRAP10827 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.53■□□□□ 0.24
THRAP10827 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.53■□□□□ 0.24
THRAP10827 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.53■□□□□ 0.24
THRAP10827 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.53■□□□□ 0.24
THRAP10827 AC023141.13-201ENST00000604991 943 ntBASIC16.53■□□□□ 0.24
THRAP10827 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 AC007064.4-201ENST00000637740 555 ntBASIC16.53■□□□□ 0.24
THRAP10827 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
THRAP10827 AC024909.3-201ENST00000611513 2257 ntBASIC16.53■□□□□ 0.24
THRAP10827 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
THRAP10827 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
THRAP10827 ALOX12P2-203ENST00000570921 1945 ntBASIC16.53■□□□□ 0.24
THRAP10827 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.53■□□□□ 0.24
THRAP10827 PKD1P5-201ENST00000532415 10291 ntBASIC16.52■□□□□ 0.24
THRAP10827 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
THRAP10827 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
THRAP10827 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.52■□□□□ 0.24
THRAP10827 TUBB8P12-201ENST00000308911 1335 ntBASIC16.52■□□□□ 0.24
THRAP10827 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 TUBB7P-202ENST00000428444 1305 ntBASIC16.52■□□□□ 0.24
THRAP10827 TUBB8P7-204ENST00000567960 1332 ntBASIC16.52■□□□□ 0.24
THRAP10827 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.52■□□□□ 0.24
THRAP10827 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
THRAP10827 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
THRAP10827 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms