Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CAPN1P07384 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 AP006288.1-201ENST00000446065 395 ntBASIC16.22■□□□□ 0.19
CAPN1P07384 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 DNAJB3-202ENST00000449667 1266 ntBASIC16.22■□□□□ 0.19
CAPN1P07384 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.22■□□□□ 0.19
CAPN1P07384 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.22■□□□□ 0.19
CAPN1P07384 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 AC004877.2-201ENST00000623941 599 ntBASIC16.22■□□□□ 0.19
CAPN1P07384 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CAPN1P07384 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CAPN1P07384 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN1P07384 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN1P07384 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN1P07384 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 AC007326.2-201ENST00000624224 7579 ntBASIC16.21■□□□□ 0.19
CAPN1P07384 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CAPN1P07384 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.21■□□□□ 0.19
CAPN1P07384 AC211486.1-202ENST00000416371 468 ntBASIC16.21■□□□□ 0.19
CAPN1P07384 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN1P07384 AC211476.1-201ENST00000503899 468 ntBASIC16.21■□□□□ 0.19
CAPN1P07384 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 PDPK2P-202ENST00000562415 1191 ntBASIC16.21■□□□□ 0.19
CAPN1P07384 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.21■□□□□ 0.19
CAPN1P07384 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 C20orf181-201ENST00000623918 480 ntBASIC16.21■□□□□ 0.19
CAPN1P07384 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 AC131009.4-201ENST00000624048 1740 ntBASIC16.21■□□□□ 0.19
CAPN1P07384 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CAPN1P07384 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CAPN1P07384 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CAPN1P07384 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.21■□□□□ 0.18
CAPN1P07384 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CAPN1P07384 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CAPN1P07384 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CAPN1P07384 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CAPN1P07384 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CAPN1P07384 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.21■□□□□ 0.18
CAPN1P07384 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.21■□□□□ 0.18
CAPN1P07384 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CAPN1P07384 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 KRT8P39-201ENST00000396270 1433 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 AL031731.1-201ENST00000642131 2094 ntBASIC16.2■□□□□ 0.18
CAPN1P07384 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.2■□□□□ 0.18
CAPN1P07384 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CAPN1P07384 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CAPN1P07384 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms