Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
KDM4BO94953 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDM4BO94953 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
KDM4BO94953 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
KDM4BO94953 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.52□□□□□ -0.08
KDM4BO94953 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
KDM4BO94953 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
KDM4BO94953 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.52□□□□□ -0.09
KDM4BO94953 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.52□□□□□ -0.09
KDM4BO94953 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 AL591684.3-201ENST00000605187 298 ntBASIC14.52□□□□□ -0.09
KDM4BO94953 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
KDM4BO94953 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 AC097637.2-201ENST00000624096 1997 ntBASIC14.52□□□□□ -0.09
KDM4BO94953 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.52□□□□□ -0.09
KDM4BO94953 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.52□□□□□ -0.09
KDM4BO94953 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
KDM4BO94953 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
KDM4BO94953 AC006538.1-201ENST00000567905 1585 ntBASIC14.51□□□□□ -0.09
KDM4BO94953 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 AC004817.3-201ENST00000602957 2129 ntBASIC14.51□□□□□ -0.09
KDM4BO94953 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
KDM4BO94953 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
KDM4BO94953 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 AC092384.3-202ENST00000564646 2873 ntBASIC14.51□□□□□ -0.09
KDM4BO94953 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
KDM4BO94953 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.51□□□□□ -0.09
KDM4BO94953 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 KRT16P4-201ENST00000453883 522 ntBASIC14.51□□□□□ -0.09
KDM4BO94953 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.51□□□□□ -0.09
KDM4BO94953 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.51□□□□□ -0.09
KDM4BO94953 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
KDM4BO94953 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
KDM4BO94953 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDM4BO94953 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.5□□□□□ -0.09
KDM4BO94953 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
KDM4BO94953 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms