Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.51■□□□□ 0.23
RFPL1O75677 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.51■□□□□ 0.23
RFPL1O75677 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.51■□□□□ 0.23
RFPL1O75677 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.51■□□□□ 0.23
RFPL1O75677 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 AP001160.2-201ENST00000596071 487 ntBASIC16.51■□□□□ 0.23
RFPL1O75677 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.51■□□□□ 0.23
RFPL1O75677 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.51■□□□□ 0.23
RFPL1O75677 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.51■□□□□ 0.23
RFPL1O75677 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RFPL1O75677 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.51■□□□□ 0.23
RFPL1O75677 AC006504.4-201ENST00000592118 1568 ntBASIC16.51■□□□□ 0.23
RFPL1O75677 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.51■□□□□ 0.23
RFPL1O75677 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RFPL1O75677 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RFPL1O75677 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RFPL1O75677 AP002414.3-201ENST00000589352 1468 ntBASIC16.5■□□□□ 0.23
RFPL1O75677 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
RFPL1O75677 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.5■□□□□ 0.23
RFPL1O75677 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.5■□□□□ 0.23
RFPL1O75677 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.5■□□□□ 0.23
RFPL1O75677 RPS8P6-201ENST00000426177 609 ntBASIC16.5■□□□□ 0.23
RFPL1O75677 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 AC004967.1-201ENST00000453589 447 ntBASIC16.5■□□□□ 0.23
RFPL1O75677 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.5■□□□□ 0.23
RFPL1O75677 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
RFPL1O75677 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 AC002347.1-201ENST00000569543 541 ntBASIC16.5■□□□□ 0.23
RFPL1O75677 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.5■□□□□ 0.23
RFPL1O75677 MIR1199-201ENST00000621445 119 ntBASIC16.5■□□□□ 0.23
RFPL1O75677 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.5■□□□□ 0.23
RFPL1O75677 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RFPL1O75677 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RFPL1O75677 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RFPL1O75677 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
RFPL1O75677 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.5■□□□□ 0.23
RFPL1O75677 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 PMS2P2-201ENST00000425039 1128 ntBASIC16.49■□□□□ 0.23
RFPL1O75677 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.49■□□□□ 0.23
RFPL1O75677 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.49■□□□□ 0.23
RFPL1O75677 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.49■□□□□ 0.23
RFPL1O75677 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.49■□□□□ 0.23
RFPL1O75677 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.49■□□□□ 0.23
RFPL1O75677 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.49■□□□□ 0.23
RFPL1O75677 AL805961.1-202ENST00000641562 540 ntBASIC16.49■□□□□ 0.23
RFPL1O75677 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFPL1O75677 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms