Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
UPK1AO00322 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.59■□□□□ 0.09
UPK1AO00322 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 AL513480.1-201ENST00000451731 511 ntBASIC15.59■□□□□ 0.09
UPK1AO00322 AC034105.1-201ENST00000563488 319 ntBASIC15.59■□□□□ 0.09
UPK1AO00322 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 IL9RP2-201ENST00000423948 1312 ntBASIC15.59■□□□□ 0.09
UPK1AO00322 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.59■□□□□ 0.09
UPK1AO00322 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.59■□□□□ 0.09
UPK1AO00322 AL136379.1-201ENST00000623471 2642 ntBASIC15.59■□□□□ 0.09
UPK1AO00322 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 AC112504.1-201ENST00000623415 1841 ntBASIC15.59■□□□□ 0.09
UPK1AO00322 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
UPK1AO00322 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.59■□□□□ 0.09
UPK1AO00322 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.58■□□□□ 0.09
UPK1AO00322 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UPK1AO00322 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
UPK1AO00322 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
UPK1AO00322 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.58■□□□□ 0.09
UPK1AO00322 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.58■□□□□ 0.09
UPK1AO00322 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UPK1AO00322 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
UPK1AO00322 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 TNRC18P2-201ENST00000417666 2714 ntBASIC15.58■□□□□ 0.08
UPK1AO00322 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
UPK1AO00322 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.58■□□□□ 0.08
UPK1AO00322 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
UPK1AO00322 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.58■□□□□ 0.08
UPK1AO00322 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 HMGA1P7-201ENST00000406908 502 ntBASIC15.58■□□□□ 0.08
UPK1AO00322 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK1AO00322 RPL13AP23-201ENST00000480739 586 ntBASIC15.58■□□□□ 0.08
UPK1AO00322 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK1AO00322 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.58■□□□□ 0.08
UPK1AO00322 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.58■□□□□ 0.08
UPK1AO00322 AC096734.2-201ENST00000562054 433 ntBASIC15.58■□□□□ 0.08
UPK1AO00322 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.58■□□□□ 0.08
UPK1AO00322 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK1AO00322 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.58■□□□□ 0.08
UPK1AO00322 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
UPK1AO00322 AC010507.1-201ENST00000633895 436 ntBASIC15.58■□□□□ 0.08
UPK1AO00322 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
UPK1AO00322 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.58■□□□□ 0.08
UPK1AO00322 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
UPK1AO00322 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
UPK1AO00322 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK1AO00322 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.57■□□□□ 0.08
UPK1AO00322 AC026396.1-201ENST00000419388 421 ntBASIC15.57■□□□□ 0.08
UPK1AO00322 AL590627.1-203ENST00000421194 1026 ntBASIC15.57■□□□□ 0.08
UPK1AO00322 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK1AO00322 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.57■□□□□ 0.08
UPK1AO00322 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.57■□□□□ 0.08
UPK1AO00322 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.57■□□□□ 0.08
UPK1AO00322 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.57■□□□□ 0.08
UPK1AO00322 AL645728.2-201ENST00000641974 660 ntBASIC15.57■□□□□ 0.08
UPK1AO00322 LINC02228-204ENST00000642115 2962 ntBASIC15.57■□□□□ 0.08
UPK1AO00322 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms