Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.72■□□□□ 0.11
PDLIM1O00151 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM1O00151 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 AC012313.10-201ENST00000623509 926 ntBASIC15.72■□□□□ 0.11
PDLIM1O00151 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM1O00151 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
PDLIM1O00151 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PDLIM1O00151 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.72■□□□□ 0.11
PDLIM1O00151 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.72■□□□□ 0.11
PDLIM1O00151 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
PDLIM1O00151 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM1O00151 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
PDLIM1O00151 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 TSPY19P-201ENST00000418461 509 ntBASIC15.71■□□□□ 0.11
PDLIM1O00151 TSPY18P-201ENST00000441642 509 ntBASIC15.71■□□□□ 0.11
PDLIM1O00151 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM1O00151 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.71■□□□□ 0.11
PDLIM1O00151 PRELID1P1-202ENST00000567272 903 ntBASIC15.71■□□□□ 0.11
PDLIM1O00151 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.71■□□□□ 0.11
PDLIM1O00151 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.71■□□□□ 0.11
PDLIM1O00151 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDLIM1O00151 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.71■□□□□ 0.11
PDLIM1O00151 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.71■□□□□ 0.1
PDLIM1O00151 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDLIM1O00151 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.71■□□□□ 0.1
PDLIM1O00151 AC009336.1-201ENST00000608941 1553 ntBASIC15.7■□□□□ 0.1
PDLIM1O00151 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 AP005117.1-202ENST00000581724 1908 ntBASIC15.7■□□□□ 0.1
PDLIM1O00151 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.7■□□□□ 0.1
PDLIM1O00151 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.7■□□□□ 0.1
PDLIM1O00151 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDLIM1O00151 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PDLIM1O00151 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDLIM1O00151 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms