Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 AP002414.4-201ENST00000589764 1148 ntBASIC17.89■□□□□ 0.45
CCDC66A2RUB6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 AC026748.1-201ENST00000624349 3251 ntBASIC17.89■□□□□ 0.45
CCDC66A2RUB6 AC073347.1-201ENST00000421633 2643 ntBASIC17.89■□□□□ 0.45
CCDC66A2RUB6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.89■□□□□ 0.45
CCDC66A2RUB6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC66A2RUB6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 POM121L3P-201ENST00000419331 1163 ntBASIC17.88■□□□□ 0.45
CCDC66A2RUB6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 AL391256.1-201ENST00000443260 1855 ntBASIC17.88■□□□□ 0.45
CCDC66A2RUB6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC66A2RUB6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 PCED1CP-201ENST00000419887 785 ntBASIC17.87■□□□□ 0.45
CCDC66A2RUB6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.87■□□□□ 0.45
CCDC66A2RUB6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 DUX4L17-201ENST00000557360 1267 ntBASIC17.87■□□□□ 0.45
CCDC66A2RUB6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 AL358472.4-201ENST00000633140 710 ntBASIC17.87■□□□□ 0.45
CCDC66A2RUB6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 AL021920.2-201ENST00000624828 1351 ntBASIC17.87■□□□□ 0.45
CCDC66A2RUB6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC66A2RUB6 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms