Protein–RNA interactions for Protein: Q9UN66

PCDHB8, Protocadherin beta-8, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB8Q9UN66 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 CLIC4P2-201ENST00000601934 717 ntBASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 SPDYE12P-201ENST00000618416 771 ntBASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB8Q9UN66 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC106820.2-201ENST00000563775 3264 ntBASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 PCGF3-213ENST00000620529 1899 ntBASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 CALY-203ENST00000368558 825 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC241585.1-201ENST00000433527 519 ntBASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC027369.6-201ENST00000525520 931 ntBASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 GGT3P-204ENST00000453783 1664 ntBASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 AC078925.2-201ENST00000624013 1973 ntBASIC17.48■□□□□ 0.39
PCDHB8Q9UN66 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 REC114-201ENST00000331090 927 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 MTND2P11-201ENST00000423638 648 ntBASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 AL512638.1-201ENST00000457493 794 ntBASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 HLA-V-204ENST00000476601 1289 ntBASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 AC024267.1-201ENST00000582320 895 ntBASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 AL138828.2-201ENST00000615812 383 ntBASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 AL031430.1-201ENST00000642067 1039 ntBASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB8Q9UN66 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms