Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.03■□□□□ -0
CHRNA9Q9UGM1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CHRNA9Q9UGM1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 PCGF3-213ENST00000620529 1899 ntBASIC15.02■□□□□ -0
CHRNA9Q9UGM1 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 POLD2P1-201ENST00000511220 997 ntBASIC15.02■□□□□ -0
CHRNA9Q9UGM1 AC040169.1-201ENST00000565382 521 ntBASIC15.02■□□□□ -0
CHRNA9Q9UGM1 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.02■□□□□ -0
CHRNA9Q9UGM1 AC092865.6-201ENST00000642101 219 ntBASIC15.02■□□□□ -0
CHRNA9Q9UGM1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 AL596087.1-201ENST00000400979 1969 ntBASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.02□□□□□ -0.01
CHRNA9Q9UGM1 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 AC002347.1-201ENST00000569543 541 ntBASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CHRNA9Q9UGM1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15□□□□□ -0.01
CHRNA9Q9UGM1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms