Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 AC002310.6-201ENST00000624451 1377 ntBASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CXCL1P1-201ENST00000502804 216 ntBASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RNA5SP416-201ENST00000516838 111 ntBASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RNA5SP415-201ENST00000517246 115 ntBASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 AC012640.2-201ENST00000561606 901 ntBASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 LINC00895-201ENST00000629028 1637 ntBASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LINC00474Q9P2X8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 AC132872.4-202ENST00000622924 2756 ntBASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 AC009947.1-201ENST00000444350 727 ntBASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 HLA-J-202ENST00000469281 1241 ntBASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 RPL13AP23-201ENST00000480739 586 ntBASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 RNA5SP419-201ENST00000515908 135 ntBASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.79□□□□□ -0.68
LINC00474Q9P2X8 MPDU1-223ENST00000582151 728 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms