Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 AC084346.2-201ENST00000607097 949 ntBASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 AC068880.1-201ENST00000507289 2297 ntBASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SLC52A1Q9NWF4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 TARDBPP1-201ENST00000442013 1203 ntBASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 AP001889.1-201ENST00000525414 633 ntBASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 AC243562.2-201ENST00000561247 970 ntBASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SLC52A1Q9NWF4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 APOC3-202ENST00000375345 604 ntTSL 5 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SLC52A1Q9NWF4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 AC068587.3-201ENST00000526613 355 ntBASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 PTP4A1P2-201ENST00000546033 454 ntBASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC23.15■■□□□ 1.3
SLC52A1Q9NWF4 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 AC020907.1-201ENST00000616460 1350 ntBASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SLC52A1Q9NWF4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 RN7SL219P-201ENST00000582872 296 ntBASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 GPR182-203ENST00000622922 591 ntBASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 LETM1P2-201ENST00000597330 2178 ntBASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
SLC52A1Q9NWF4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SLC52A1Q9NWF4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms