Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NEUROD4Q9HD90 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 PMS2P4-201ENST00000412466 1052 ntBASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 AC098831.1-202ENST00000438821 336 ntBASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.56■□□□□ 0.08
NEUROD4Q9HD90 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 VN2R19P-201ENST00000442399 1052 ntBASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 RPL13AP23-201ENST00000480739 586 ntBASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.55■□□□□ 0.08
NEUROD4Q9HD90 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.54■□□□□ 0.08
NEUROD4Q9HD90 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms