Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 AP005117.1-202ENST00000581724 1908 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 RNF152P1-201ENST00000397754 604 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 TSPY5P-201ENST00000426936 936 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 RN7SL606P-201ENST00000472779 293 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 AL353801.3-201ENST00000609898 542 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 GGT4P-201ENST00000623672 1708 ntBASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
SND1-IT1Q9HBX3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AC113347.1-201ENST00000413321 391 ntBASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AC092647.4-201ENST00000457211 535 ntBASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AC005363.2-201ENST00000618631 242 ntBASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 HYMAI.1-201ENST00000620949 238 ntBASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.07□□□□□ -0.64
SND1-IT1Q9HBX3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms