Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 AC093214.1-201ENST00000511688 1107 ntBASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 PCGF3-213ENST00000620529 1899 ntBASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V0A4Q9HBG4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 TUBB3P1-201ENST00000405796 1332 ntBASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 AL035633.1-201ENST00000406139 838 ntBASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 AL390955.2-201ENST00000603032 514 ntBASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V0A4Q9HBG4 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
ATP6V0A4Q9HBG4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 FLJ38576-201ENST00000623820 2459 ntBASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AC051619.7-201ENST00000568314 623 ntBASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 MIR4745-201ENST00000577608 62 ntBASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.26■□□□□ 0.51
ATP6V0A4Q9HBG4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 AGGF1P2-201ENST00000426656 2106 ntBASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ATP6V0A4Q9HBG4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms