Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.44□□□□□ -0.1
ELL3Q9HB65 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
ELL3Q9HB65 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.44□□□□□ -0.1
ELL3Q9HB65 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 AC006538.1-201ENST00000567905 1585 ntBASIC14.43□□□□□ -0.1
ELL3Q9HB65 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 AC004870.1-201ENST00000315132 882 ntBASIC14.43□□□□□ -0.1
ELL3Q9HB65 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 AL031008.1-201ENST00000619963 541 ntBASIC14.43□□□□□ -0.1
ELL3Q9HB65 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.43□□□□□ -0.1
ELL3Q9HB65 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 LINC00895-201ENST00000629028 1637 ntBASIC14.43□□□□□ -0.1
ELL3Q9HB65 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
ELL3Q9HB65 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.43□□□□□ -0.1
ELL3Q9HB65 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 NCF1C-201ENST00000438382 1427 ntBASIC14.42□□□□□ -0.1
ELL3Q9HB65 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 AP002414.1-201ENST00000391405 1147 ntBASIC14.42□□□□□ -0.1
ELL3Q9HB65 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
ELL3Q9HB65 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
ELL3Q9HB65 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ELL3Q9HB65 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ELL3Q9HB65 MST1L-201ENST00000442552 2185 ntBASIC14.41□□□□□ -0.1
ELL3Q9HB65 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.41□□□□□ -0.1
ELL3Q9HB65 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ELL3Q9HB65 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ELL3Q9HB65 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ELL3Q9HB65 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ELL3Q9HB65 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.41□□□□□ -0.1
ELL3Q9HB65 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms