Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.84■□□□□ 0.29
SP110Q9HB58 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.84■□□□□ 0.29
SP110Q9HB58 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.84■□□□□ 0.29
SP110Q9HB58 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.84■□□□□ 0.29
SP110Q9HB58 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 PRYP6-201ENST00000514804 343 ntBASIC16.84■□□□□ 0.29
SP110Q9HB58 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.84■□□□□ 0.29
SP110Q9HB58 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
SP110Q9HB58 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.84■□□□□ 0.29
SP110Q9HB58 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.84■□□□□ 0.29
SP110Q9HB58 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.84■□□□□ 0.29
SP110Q9HB58 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SP110Q9HB58 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.84■□□□□ 0.29
SP110Q9HB58 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SP110Q9HB58 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SP110Q9HB58 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP110Q9HB58 AL662844.4-201ENST00000606367 2838 ntBASIC16.83■□□□□ 0.29
SP110Q9HB58 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP110Q9HB58 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP110Q9HB58 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SP110Q9HB58 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP110Q9HB58 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SP110Q9HB58 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 MIR1233-2-201ENST00000408138 82 ntBASIC16.83■□□□□ 0.28
SP110Q9HB58 MIR1233-1-201ENST00000408722 82 ntBASIC16.83■□□□□ 0.28
SP110Q9HB58 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.83■□□□□ 0.28
SP110Q9HB58 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.83■□□□□ 0.28
SP110Q9HB58 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
SP110Q9HB58 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 YBX1P5-201ENST00000509441 847 ntBASIC16.83■□□□□ 0.28
SP110Q9HB58 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.83■□□□□ 0.28
SP110Q9HB58 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SP110Q9HB58 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SP110Q9HB58 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SP110Q9HB58 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
SP110Q9HB58 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SP110Q9HB58 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 AC073439.1-201ENST00000624121 1774 ntBASIC16.82■□□□□ 0.28
SP110Q9HB58 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.82■□□□□ 0.28
SP110Q9HB58 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.82■□□□□ 0.28
SP110Q9HB58 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.82■□□□□ 0.28
SP110Q9HB58 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.82■□□□□ 0.28
SP110Q9HB58 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SP110Q9HB58 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SP110Q9HB58 AC211486.1-202ENST00000416371 468 ntBASIC16.82■□□□□ 0.28
SP110Q9HB58 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms