Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 NUS1P2-201ENST00000417358 873 ntBASIC15.78■□□□□ 0.12
PIF1Q9H611 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.78■□□□□ 0.12
PIF1Q9H611 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.78■□□□□ 0.12
PIF1Q9H611 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.78■□□□□ 0.12
PIF1Q9H611 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 AL353135.1-201ENST00000606729 504 ntBASIC15.78■□□□□ 0.12
PIF1Q9H611 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 AL513477.1-201ENST00000602865 2407 ntBASIC15.78■□□□□ 0.12
PIF1Q9H611 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PIF1Q9H611 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.78■□□□□ 0.12
PIF1Q9H611 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PIF1Q9H611 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.78■□□□□ 0.12
PIF1Q9H611 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.78■□□□□ 0.12
PIF1Q9H611 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.78■□□□□ 0.12
PIF1Q9H611 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.78■□□□□ 0.12
PIF1Q9H611 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PIF1Q9H611 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.77■□□□□ 0.12
PIF1Q9H611 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.77■□□□□ 0.12
PIF1Q9H611 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.77■□□□□ 0.12
PIF1Q9H611 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.77■□□□□ 0.12
PIF1Q9H611 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 HCG4P8-203ENST00000443049 980 ntBASIC15.77■□□□□ 0.12
PIF1Q9H611 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.77■□□□□ 0.12
PIF1Q9H611 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.77■□□□□ 0.12
PIF1Q9H611 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.77■□□□□ 0.12
PIF1Q9H611 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.77■□□□□ 0.12
PIF1Q9H611 AC099336.1-202ENST00000602961 463 ntBASIC15.77■□□□□ 0.12
PIF1Q9H611 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.77■□□□□ 0.12
PIF1Q9H611 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PIF1Q9H611 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.77■□□□□ 0.11
PIF1Q9H611 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PIF1Q9H611 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PIF1Q9H611 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PIF1Q9H611 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 KRT16P4-201ENST00000453883 522 ntBASIC15.76■□□□□ 0.11
PIF1Q9H611 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 MIR3652-201ENST00000579335 131 ntBASIC15.76■□□□□ 0.11
PIF1Q9H611 MIR5100-201ENST00000579544 119 ntBASIC15.76■□□□□ 0.11
PIF1Q9H611 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.76■□□□□ 0.11
PIF1Q9H611 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC15.76■□□□□ 0.11
PIF1Q9H611 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
PIF1Q9H611 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.76■□□□□ 0.11
PIF1Q9H611 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.76■□□□□ 0.11
PIF1Q9H611 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.76■□□□□ 0.11
PIF1Q9H611 AC104640.1-201ENST00000562617 2109 ntBASIC15.76■□□□□ 0.11
PIF1Q9H611 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PIF1Q9H611 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.76■□□□□ 0.11
PIF1Q9H611 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PIF1Q9H611 TOP3BP1-201ENST00000420768 1380 ntBASIC15.75■□□□□ 0.11
PIF1Q9H611 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PIF1Q9H611 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PIF1Q9H611 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms