Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CCDC68Q9H2F9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CRYGEP-201ENST00000412192 528 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CXCL1P1-201ENST00000502804 216 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 AL049840.3-201ENST00000602669 611 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 AC116407.3-201ENST00000623905 1129 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 AC092364.2-201ENST00000596710 2692 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 CYP2T1P-202ENST00000641596 2535 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CCDC68Q9H2F9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 MRPL3P1-201ENST00000400109 1033 ntBASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC68Q9H2F9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC68Q9H2F9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms