Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.54■■■□□ 2.166e-7■□□□□ 10.8
XRN2Q9H0D6 LONP1-205ENST00000587365 641 ntTSL 528.5■■■□□ 2.156e-7■□□□□ 10.8
XRN2Q9H0D6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.158e-6■□□□□ 10.8
XRN2Q9H0D6 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.41■■■□□ 2.144e-11■□□□□ 10.8
XRN2Q9H0D6 RING1-202ENST00000478431 1532 ntTSL 1 (best)27.57■■■□□ 28e-6■□□□□ 10.8
XRN2Q9H0D6 PTPRA-207ENST00000431048 707 ntTSL 527.47■■□□□ 1.996e-7■□□□□ 10.8
XRN2Q9H0D6 CERS2-207ENST00000457392 545 ntTSL 327.46■■□□□ 1.991e-9■□□□□ 10.8
XRN2Q9H0D6 FGFR4-216ENST00000514472 552 ntTSL 427.1■■□□□ 1.936e-7■□□□□ 10.8
XRN2Q9H0D6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.02■■□□□ 1.924e-11■□□□□ 10.8
XRN2Q9H0D6 RHOT2-202ENST00000561711 644 ntTSL 326.79■■□□□ 1.886e-7■□□□□ 10.8
XRN2Q9H0D6 XIAP-203ENST00000422098 390 ntTSL 426.53■■□□□ 1.848e-6■□□□□ 10.8
XRN2Q9H0D6 SETD5-209ENST00000431285 1824 ntTSL 526.33■■□□□ 1.811e-7■□□□□ 10.8
XRN2Q9H0D6 GAS8-210ENST00000564853 416 ntTSL 1 (best)26.21■■□□□ 1.798e-6■□□□□ 10.8
XRN2Q9H0D6 PSME3-211ENST00000591152 1018 ntTSL 326.2■■□□□ 1.788e-6■□□□□ 10.8
XRN2Q9H0D6 ENGASE-204ENST00000578419 1381 ntTSL 226.16■■□□□ 1.781e-12■□□□□ 10.8
XRN2Q9H0D6 E2F6-205ENST00000437573 1253 ntTSL 1 (best)26.08■■□□□ 1.778e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-208ENST00000468775 1061 ntTSL 226.08■■□□□ 1.778e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-C17orf49-202ENST00000547863 1662 ntTSL 225.99■■□□□ 1.758e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-205ENST00000552176 1485 ntTSL 225.75■■□□□ 1.718e-6■□□□□ 10.8
XRN2Q9H0D6 PSME3-204ENST00000543428 956 ntTSL 225.71■■□□□ 1.718e-6■□□□□ 10.8
XRN2Q9H0D6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC25.67■■□□□ 1.78e-6■□□□□ 10.8
XRN2Q9H0D6 HOXA3-204ENST00000521401 598 ntTSL 325.67■■□□□ 1.78e-6■□□□□ 10.8
XRN2Q9H0D6 HOXA3-206ENST00000522788 581 ntTSL 325.67■■□□□ 1.78e-6■□□□□ 10.8
XRN2Q9H0D6 FUBP3-203ENST00000467100 2228 ntTSL 225.6■■□□□ 1.698e-6■□□□□ 10.8
XRN2Q9H0D6 FAM160B2-211ENST00000498344 917 ntTSL 225.52■■□□□ 1.688e-6■□□□□ 10.8
XRN2Q9H0D6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.678e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-213ENST00000580320 915 ntTSL 225.45■■□□□ 1.668e-6■□□□□ 10.8
XRN2Q9H0D6 EXOC3L4-205ENST00000560102 563 ntTSL 325.25■■□□□ 1.634e-11■□□□□ 10.8
XRN2Q9H0D6 DCXR-207ENST00000578885 968 ntTSL 525.25■■□□□ 1.638e-6■□□□□ 10.8
XRN2Q9H0D6 FAM160B2-202ENST00000427751 932 ntTSL 525.21■■□□□ 1.638e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.628e-6■□□□□ 10.8
XRN2Q9H0D6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.621e-9■□□□□ 10.8
XRN2Q9H0D6 E2F6-210ENST00000498701 610 ntTSL 425.14■■□□□ 1.628e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-206ENST00000578273 877 ntTSL 525.06■■□□□ 1.68e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-210ENST00000579334 1251 ntTSL 524.94■■□□□ 1.588e-6■□□□□ 10.8
XRN2Q9H0D6 FGFR4-209ENST00000507708 476 ntTSL 324.89■■□□□ 1.586e-7■□□□□ 10.8
XRN2Q9H0D6 FGFR4-212ENST00000510911 709 ntTSL 424.89■■□□□ 1.586e-7■□□□□ 10.8
XRN2Q9H0D6 RAI1-205ENST00000582514 878 ntTSL 224.87■■□□□ 1.578e-6■□□□□ 10.8
XRN2Q9H0D6 PSME3-207ENST00000586114 580 ntTSL 424.75■■□□□ 1.558e-6■□□□□ 10.8
XRN2Q9H0D6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.558e-6■□□□□ 10.8
XRN2Q9H0D6 RHOT2-221ENST00000569358 1273 ntTSL 524.61■■□□□ 1.533e-7■□□□□ 10.8
XRN2Q9H0D6 PHF12-213ENST00000583747 648 ntTSL 324.57■■□□□ 1.528e-6■□□□□ 10.8
XRN2Q9H0D6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.528e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-209ENST00000575822 613 ntTSL 324.48■■□□□ 1.518e-6■□□□□ 10.8
XRN2Q9H0D6 MLST8-208ENST00000562392 1662 ntTSL 224.46■■□□□ 1.518e-6■□□□□ 10.8
XRN2Q9H0D6 GYG2-208ENST00000520904 624 ntTSL 324.44■■□□□ 1.51e-9■□□□□ 10.8
XRN2Q9H0D6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.58e-6■□□□□ 10.8
XRN2Q9H0D6 VARS-218ENST00000459667 793 ntTSL 324.35■■□□□ 1.498e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-227ENST00000582725 1127 ntTSL 524.25■■□□□ 1.476e-7■□□□□ 10.8
XRN2Q9H0D6 PAXX-206ENST00000492564 701 ntTSL 324.22■■□□□ 1.478e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-214ENST00000580750 1076 ntTSL 524.22■■□□□ 1.478e-6■□□□□ 10.8
XRN2Q9H0D6 RHOT2-217ENST00000567589 550 ntTSL 324.08■■□□□ 1.454e-11■□□□□ 10.8
XRN2Q9H0D6 PHF12-211ENST00000582853 555 ntTSL 424.02■■□□□ 1.448e-6■□□□□ 10.8
XRN2Q9H0D6 ENGASE-202ENST00000311595 1381 ntTSL 524.02■■□□□ 1.441e-12■□□□□ 10.8
XRN2Q9H0D6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.01■■□□□ 1.438e-6■□□□□ 10.8
XRN2Q9H0D6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.91■■□□□ 1.428e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-212ENST00000579842 715 ntTSL 323.85■■□□□ 1.418e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-218ENST00000582900 676 ntTSL 323.85■■□□□ 1.418e-6■□□□□ 10.8
XRN2Q9H0D6 COLCA2-203ENST00000528846 823 ntTSL 323.77■■□□□ 1.48e-6■□□□□ 10.8
XRN2Q9H0D6 PAXX-207ENST00000493968 958 ntTSL 1 (best)23.73■■□□□ 1.398e-6■□□□□ 10.8
XRN2Q9H0D6 COPE-204ENST00000593827 601 ntTSL 323.69■■□□□ 1.388e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC23.65■■□□□ 1.386e-7■□□□□ 10.8
XRN2Q9H0D6 PSME3-209ENST00000589469 733 ntTSL 323.58■■□□□ 1.378e-6■□□□□ 10.8
XRN2Q9H0D6 CDC37-207ENST00000589755 793 ntTSL 223.54■■□□□ 1.364e-11■□□□□ 10.8
XRN2Q9H0D6 GAS8-204ENST00000540721 1308 ntTSL 223.44■■□□□ 1.348e-6■□□□□ 10.8
XRN2Q9H0D6 E2F6-203ENST00000421117 907 ntTSL 523.41■■□□□ 1.348e-6■□□□□ 10.8
XRN2Q9H0D6 DCXR-215ENST00000581584 766 ntTSL 323.36■■□□□ 1.338e-6■□□□□ 10.8
XRN2Q9H0D6 XIAP-207ENST00000468691 764 ntTSL 523.24■■□□□ 1.318e-6■□□□□ 10.8
XRN2Q9H0D6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.2■■□□□ 1.31e-9■□□□□ 10.8
XRN2Q9H0D6 COPE-208ENST00000598969 1770 ntTSL 523.18■■□□□ 1.38e-6■□□□□ 10.8
XRN2Q9H0D6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.36e-7■□□□□ 10.8
XRN2Q9H0D6 PKD1-218ENST00000485120 696 ntTSL 323.16■■□□□ 1.38e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.36e-7■□□□□ 10.8
XRN2Q9H0D6 ENGASE-208ENST00000583646 471 ntTSL 223.1■■□□□ 1.291e-12■□□□□ 10.8
XRN2Q9H0D6 RNASEK-C17orf49-203ENST00000549775 1856 ntTSL 523.1■■□□□ 1.298e-6■□□□□ 10.8
XRN2Q9H0D6 C17orf62-208ENST00000577696 656 ntTSL 423.08■■□□□ 1.296e-7■□□□□ 10.8
XRN2Q9H0D6 PSME3-206ENST00000585805 1364 ntTSL 1 (best)23.04■■□□□ 1.288e-6■□□□□ 10.8
XRN2Q9H0D6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.96■■□□□ 1.278e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-204ENST00000441818 1793 ntTSL 1 (best)22.9■■□□□ 1.264e-11■□□□□ 10.8
XRN2Q9H0D6 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.88■■□□□ 1.258e-6■□□□□ 10.8
XRN2Q9H0D6 TBCD-222ENST00000576677 1926 ntTSL 1 (best)22.88■■□□□ 1.258e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-219ENST00000545574 878 ntTSL 522.81■■□□□ 1.248e-6■□□□□ 10.8
XRN2Q9H0D6 FGFR4-208ENST00000503708 770 ntTSL 422.74■■□□□ 1.236e-7■□□□□ 10.8
XRN2Q9H0D6 CDC37-210ENST00000593124 1389 ntTSL 522.74■■□□□ 1.234e-11■□□□□ 10.8
XRN2Q9H0D6 PCNP-207ENST00000498274 786 ntTSL 222.66■■□□□ 1.221e-12■□□□□ 10.8
XRN2Q9H0D6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.62■■□□□ 1.218e-6■□□□□ 10.8
XRN2Q9H0D6 FLII-228ENST00000582626 573 ntTSL 322.58■■□□□ 1.218e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.28e-6■□□□□ 10.8
XRN2Q9H0D6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.56■■□□□ 1.28e-6■□□□□ 10.8
XRN2Q9H0D6 TNIP2-204ENST00000505186 980 ntTSL 322.54■■□□□ 1.28e-6■□□□□ 10.8
XRN2Q9H0D6 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.48■■□□□ 1.198e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-206ENST00000456595 1688 ntTSL 1 (best)22.41■■□□□ 1.184e-11■□□□□ 10.8
XRN2Q9H0D6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC22.38■■□□□ 1.174e-11■□□□□ 10.8
XRN2Q9H0D6 KANSL3-202ENST00000416138 552 ntTSL 422.37■■□□□ 1.178e-6■□□□□ 10.8
XRN2Q9H0D6 PEX5-217ENST00000544456 579 ntTSL 422.33■■□□□ 1.178e-6■□□□□ 10.8
XRN2Q9H0D6 TRMU-205ENST00000453630 1775 ntTSL 222.26■■□□□ 1.154e-11■□□□□ 10.8
XRN2Q9H0D6 TRMU-203ENST00000381021 1830 ntTSL 222.2■■□□□ 1.144e-11■□□□□ 10.8
XRN2Q9H0D6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.15■■□□□ 1.146e-7■□□□□ 10.8
XRN2Q9H0D6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.97■■□□□ 1.118e-6■□□□□ 10.8
XRN2Q9H0D6 XIAP-210ENST00000497640 533 ntTSL 1 (best)21.77■■□□□ 1.088e-6■□□□□ 10.8
Retrieved 100 of 21,068 protein–RNA pairs in 118.8 ms