Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 PAUPAR-201ENST00000630360 2965 ntBASIC13.18□□□□□ -0.3
RNF2Q99496 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RNF2Q99496 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RNF2Q99496 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF2Q99496 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF2Q99496 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF2Q99496 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 AC148477.5-201ENST00000625164 1645 ntBASIC13.17□□□□□ -0.3
RNF2Q99496 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RNF2Q99496 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.17□□□□□ -0.3
RNF2Q99496 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 SIGLEC30P-201ENST00000455569 941 ntBASIC13.17□□□□□ -0.3
RNF2Q99496 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.17□□□□□ -0.3
RNF2Q99496 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.17□□□□□ -0.3
RNF2Q99496 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 AC013467.2-201ENST00000605472 835 ntBASIC13.17□□□□□ -0.3
RNF2Q99496 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF2Q99496 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
RNF2Q99496 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RNF2Q99496 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF2Q99496 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF2Q99496 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RNF2Q99496 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
RNF2Q99496 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF2Q99496 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
RNF2Q99496 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.16□□□□□ -0.3
RNF2Q99496 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.16□□□□□ -0.3
RNF2Q99496 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RNF2Q99496 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.16□□□□□ -0.3
RNF2Q99496 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms