Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 PMS2P4-201ENST00000412466 1052 ntBASIC15.63■□□□□ 0.09
BBS4Q96RK4 AL590627.1-203ENST00000421194 1026 ntBASIC15.63■□□□□ 0.09
BBS4Q96RK4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 POU5F1P6-201ENST00000466990 990 ntBASIC15.63■□□□□ 0.09
BBS4Q96RK4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 AC145285.3-201ENST00000564603 959 ntBASIC15.63■□□□□ 0.09
BBS4Q96RK4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 AC018695.7-201ENST00000624587 2492 ntBASIC15.63■□□□□ 0.09
BBS4Q96RK4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 IL9RP2-201ENST00000423948 1312 ntBASIC15.63■□□□□ 0.09
BBS4Q96RK4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
BBS4Q96RK4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
BBS4Q96RK4 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 RHOQP3-201ENST00000437982 621 ntBASIC15.62■□□□□ 0.09
BBS4Q96RK4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 AC064836.3-201ENST00000607928 673 ntBASIC15.62■□□□□ 0.09
BBS4Q96RK4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
BBS4Q96RK4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.62■□□□□ 0.09
BBS4Q96RK4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 AC007967.2-201ENST00000432613 625 ntBASIC15.61■□□□□ 0.09
BBS4Q96RK4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 FDX1P1-201ENST00000449115 551 ntBASIC15.61■□□□□ 0.09
BBS4Q96RK4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
BBS4Q96RK4 AC034105.1-201ENST00000563488 319 ntBASIC15.61■□□□□ 0.09
BBS4Q96RK4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.61■□□□□ 0.09
BBS4Q96RK4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms