Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 AC140878.1-201ENST00000565277 250 ntBASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 AC061975.2-201ENST00000581722 295 ntBASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 AC009053.2-201ENST00000563701 2365 ntBASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.23■□□□□ 0.35
SMARCD1Q96GM5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMARCD1Q96GM5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 AL592424.1-201ENST00000563624 1536 ntBASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 AL035456.1-201ENST00000456064 1369 ntBASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMARCD1Q96GM5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms