Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CLDND2Q8NHS1 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.02□□□□□ -0.16
CLDND2Q8NHS1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 AKAP8P1-201ENST00000434743 1349 ntBASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 AC243562.1-201ENST00000560672 389 ntBASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.02□□□□□ -0.17
CLDND2Q8NHS1 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 AC116353.5-201ENST00000638148 1699 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 MIR770-201ENST00000390219 98 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 KRT18P32-201ENST00000424695 1287 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 AC093512.1-201ENST00000617969 520 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 AL513523.2-202ENST00000427283 2040 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 SLC22A20-204ENST00000530038 1673 ntBASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLDND2Q8NHS1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms