Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.85■□□□□ 0.45
VPS52Q8N1B4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 AL035252.4-201ENST00000624174 288 ntBASIC17.85■□□□□ 0.45
VPS52Q8N1B4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.85■□□□□ 0.45
VPS52Q8N1B4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 AC092580.3-201ENST00000430932 139 ntBASIC17.84■□□□□ 0.45
VPS52Q8N1B4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.84■□□□□ 0.45
VPS52Q8N1B4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.84■□□□□ 0.45
VPS52Q8N1B4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 KRT8P49-201ENST00000604166 1432 ntBASIC17.83■□□□□ 0.45
VPS52Q8N1B4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
VPS52Q8N1B4 AL021920.2-201ENST00000624828 1351 ntBASIC17.83■□□□□ 0.45
VPS52Q8N1B4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 CYP2A7P1-201ENST00000595391 815 ntBASIC17.83■□□□□ 0.44
VPS52Q8N1B4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VPS52Q8N1B4 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.82■□□□□ 0.44
VPS52Q8N1B4 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 AC063926.2-201ENST00000623766 1308 ntBASIC17.82■□□□□ 0.44
VPS52Q8N1B4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 AC046158.3-201ENST00000624947 2558 ntBASIC17.82■□□□□ 0.44
VPS52Q8N1B4 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.82■□□□□ 0.44
VPS52Q8N1B4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms