Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SIX5Q8N196 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SIX5Q8N196 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SIX5Q8N196 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 AL355312.1-201ENST00000407115 2176 ntBASIC16.81■□□□□ 0.28
SIX5Q8N196 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SIX5Q8N196 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SIX5Q8N196 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.81■□□□□ 0.28
SIX5Q8N196 SERBP1P3-201ENST00000459980 809 ntBASIC16.81■□□□□ 0.28
SIX5Q8N196 ELK1P1-201ENST00000485699 580 ntBASIC16.81■□□□□ 0.28
SIX5Q8N196 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.81■□□□□ 0.28
SIX5Q8N196 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
SIX5Q8N196 AC123567.1-201ENST00000548294 1261 ntBASIC16.81■□□□□ 0.28
SIX5Q8N196 SNX29P1-201ENST00000548357 1007 ntBASIC16.81■□□□□ 0.28
SIX5Q8N196 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.81■□□□□ 0.28
SIX5Q8N196 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.81■□□□□ 0.28
SIX5Q8N196 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 AC012317.2-201ENST00000623305 2251 ntBASIC16.81■□□□□ 0.28
SIX5Q8N196 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SIX5Q8N196 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.81■□□□□ 0.28
SIX5Q8N196 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SIX5Q8N196 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.8■□□□□ 0.28
SIX5Q8N196 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
SIX5Q8N196 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
SIX5Q8N196 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.8■□□□□ 0.28
SIX5Q8N196 MEP1AP4-201ENST00000423244 1087 ntBASIC16.8■□□□□ 0.28
SIX5Q8N196 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.8■□□□□ 0.28
SIX5Q8N196 MIR4538-201ENST00000581377 78 ntBASIC16.8■□□□□ 0.28
SIX5Q8N196 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SIX5Q8N196 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.8■□□□□ 0.28
SIX5Q8N196 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.8■□□□□ 0.28
SIX5Q8N196 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SIX5Q8N196 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SIX5Q8N196 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 AL596257.1-201ENST00000641463 2694 ntBASIC16.79■□□□□ 0.28
SIX5Q8N196 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SIX5Q8N196 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIX5Q8N196 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms