Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 TSSC2-201ENST00000450217 709 ntBASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 SIGLEC16-201ENST00000599858 1437 ntBASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 PCGF3-213ENST00000620529 1899 ntBASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM42Q8IWZ5 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AC112504.1-201ENST00000623415 1841 ntBASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 MIR648-201ENST00000385046 94 ntBASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AP000867.4-201ENST00000641616 219 ntBASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AL122018.1-201ENST00000446607 2310 ntBASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM42Q8IWZ5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 ATP5G2P1-201ENST00000433580 426 ntBASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 HCG4P8-203ENST00000443049 980 ntBASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM42Q8IWZ5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms