Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 AL671710.1-201ENST00000610245 2349 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 EGFEM1P-202ENST00000431685 1563 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RN7SL752P-201ENST00000463779 287 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 MIR4525-201ENST00000580000 75 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 MIR6787-201ENST00000616675 61 ntBASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RP1L1Q8IWN7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 LINC01451-201ENST00000623792 534 ntBASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 NME6-203ENST00000415644 849 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 AC004945.1-201ENST00000416738 983 ntBASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 SNX29P1-201ENST00000548357 1007 ntBASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
RP1L1Q8IWN7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 AC087499.6-201ENST00000411576 835 ntBASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 PDIA3P1-201ENST00000471856 1510 ntBASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RP1L1Q8IWN7 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms