Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATPAF1Q5TC12 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AL136379.1-201ENST00000623471 2642 ntBASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 FDX1P1-201ENST00000449115 551 ntBASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AC093909.1-201ENST00000504731 1122 ntBASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 AP001005.1-201ENST00000571755 1248 ntBASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATPAF1Q5TC12 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.33□□□□□ -0.11
ATPAF1Q5TC12 TCAF2P1-201ENST00000291129 2421 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AP002414.1-201ENST00000391405 1147 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AC009078.2-202ENST00000463353 338 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AC136632.2-201ENST00000512891 861 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 TERC-201ENST00000602385 541 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AL805961.1-202ENST00000641562 540 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 AF228730.7-201ENST00000641842 219 ntBASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.33□□□□□ -0.12
ATPAF1Q5TC12 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms