Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 AC104819.1-201ENST00000504587 486 ntBASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SH2D4BQ5SQS7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 AL671710.1-201ENST00000610245 2349 ntBASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 GGT3P-204ENST00000453783 1664 ntBASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SH2D4BQ5SQS7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SH2D4BQ5SQS7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 AL596087.1-201ENST00000400979 1969 ntBASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 AL353135.1-201ENST00000606729 504 ntBASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 NPAP1P7-201ENST00000613027 823 ntBASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SH2D4BQ5SQS7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms