Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC005332.1-201ENST00000577698 1310 ntBASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 SPDYE13P-201ENST00000445314 798 ntBASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 TERC-201ENST00000602385 541 ntBASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AC136621.1-201ENST00000624017 2304 ntBASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 AL009178.2-201ENST00000597278 2719 ntBASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 PCGF3-213ENST00000620529 1899 ntBASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
ANKRD55Q3KP44 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 KRT8P39-201ENST00000396270 1433 ntBASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 AC006486.2-201ENST00000624246 2199 ntBASIC13.71□□□□□ -0.22
ANKRD55Q3KP44 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 BX276092.5-203ENST00000456199 560 ntBASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 AL121672.3-201ENST00000608644 468 ntBASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 AC069148.1-201ENST00000608741 768 ntBASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 AC116407.4-201ENST00000623319 1061 ntBASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 PMPCAP1-201ENST00000508114 1576 ntBASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ANKRD55Q3KP44 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms