Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 LINC01101-201ENST00000622953 1884 ntBASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC6LQ2NKX8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AC005840.4-201ENST00000541242 2494 ntBASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AC092919.2-201ENST00000623631 1645 ntBASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 TSPY15P-201ENST00000457163 923 ntBASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 GPR32P1-201ENST00000601788 811 ntBASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 AC125634.1-201ENST00000438758 1403 ntBASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.47■□□□□ 0.39
ERCC6LQ2NKX8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 POU5F1P6-201ENST00000466990 990 ntBASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ERCC6LQ2NKX8 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ERCC6LQ2NKX8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.46■□□□□ 0.38
ERCC6LQ2NKX8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms