Protein–RNA interactions for Protein: P98173

FAM3A, Protein FAM3A, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3AP98173 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
FAM3AP98173 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.29□□□□□ -0.12
FAM3AP98173 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.29□□□□□ -0.12
FAM3AP98173 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 MIR3909-201ENST00000579518 119 ntBASIC14.29□□□□□ -0.12
FAM3AP98173 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.29□□□□□ -0.12
FAM3AP98173 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
FAM3AP98173 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 PMS2P4-201ENST00000412466 1052 ntBASIC14.28□□□□□ -0.12
FAM3AP98173 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM3AP98173 AC034105.1-201ENST00000563488 319 ntBASIC14.28□□□□□ -0.12
FAM3AP98173 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM3AP98173 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 AC104109.2-201ENST00000602919 1418 ntBASIC14.28□□□□□ -0.12
FAM3AP98173 AL121894.2-201ENST00000602977 491 ntBASIC14.28□□□□□ -0.12
FAM3AP98173 AC021097.1-201ENST00000607902 574 ntBASIC14.28□□□□□ -0.12
FAM3AP98173 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.28□□□□□ -0.12
FAM3AP98173 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.28□□□□□ -0.12
FAM3AP98173 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FAM3AP98173 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.28□□□□□ -0.12
FAM3AP98173 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.27□□□□□ -0.12
FAM3AP98173 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
FAM3AP98173 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.27□□□□□ -0.12
FAM3AP98173 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
FAM3AP98173 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 AC068418.2-201ENST00000577309 3703 ntBASIC14.27□□□□□ -0.12
FAM3AP98173 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
FAM3AP98173 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
FAM3AP98173 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
FAM3AP98173 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms