Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 RN7SL832P-201ENST00000607781 1756 ntBASIC17.3■□□□□ 0.36
USP46P62068 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.3■□□□□ 0.36
USP46P62068 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.3■□□□□ 0.36
USP46P62068 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.3■□□□□ 0.36
USP46P62068 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
USP46P62068 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 KLF2P3-201ENST00000451977 1087 ntBASIC17.3■□□□□ 0.36
USP46P62068 AC067863.1-201ENST00000494933 530 ntBASIC17.3■□□□□ 0.36
USP46P62068 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.3■□□□□ 0.36
USP46P62068 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.3■□□□□ 0.36
USP46P62068 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.3■□□□□ 0.36
USP46P62068 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
USP46P62068 RARRES2P9-201ENST00000565168 469 ntBASIC17.3■□□□□ 0.36
USP46P62068 MIR4453-201ENST00000584019 89 ntBASIC17.3■□□□□ 0.36
USP46P62068 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.3■□□□□ 0.36
USP46P62068 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC17.3■□□□□ 0.36
USP46P62068 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.3■□□□□ 0.36
USP46P62068 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 AC092850.2-201ENST00000623821 2697 ntBASIC17.3■□□□□ 0.36
USP46P62068 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
USP46P62068 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
USP46P62068 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP46P62068 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
USP46P62068 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
USP46P62068 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
USP46P62068 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.29■□□□□ 0.36
USP46P62068 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 AC125807.1-201ENST00000483097 614 ntBASIC17.29■□□□□ 0.36
USP46P62068 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.29■□□□□ 0.36
USP46P62068 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.29■□□□□ 0.36
USP46P62068 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.29■□□□□ 0.36
USP46P62068 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
USP46P62068 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.29■□□□□ 0.36
USP46P62068 AC106886.4-201ENST00000623557 2502 ntBASIC17.29■□□□□ 0.36
USP46P62068 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.29■□□□□ 0.36
USP46P62068 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
USP46P62068 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.29■□□□□ 0.36
USP46P62068 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
USP46P62068 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.28■□□□□ 0.36
USP46P62068 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.28■□□□□ 0.36
USP46P62068 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
USP46P62068 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 MIR943-201ENST00000401286 94 ntBASIC17.28■□□□□ 0.36
USP46P62068 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
USP46P62068 SPDYE7P-202ENST00000420373 878 ntBASIC17.28■□□□□ 0.36
USP46P62068 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.28■□□□□ 0.36
USP46P62068 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 HLA-A-202ENST00000376806 1854 ntBASIC17.28■□□□□ 0.36
USP46P62068 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
USP46P62068 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.28■□□□□ 0.36
USP46P62068 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP46P62068 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms