Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SSR1P43307 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.58■□□□□ 0.4
SSR1P43307 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.58■□□□□ 0.4
SSR1P43307 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSR1P43307 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SSR1P43307 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SSR1P43307 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 PMS2P1-201ENST00000431037 1228 ntBASIC17.57■□□□□ 0.4
SSR1P43307 DUSP5P1-201ENST00000441325 1139 ntBASIC17.57■□□□□ 0.4
SSR1P43307 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.57■□□□□ 0.4
SSR1P43307 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.57■□□□□ 0.4
SSR1P43307 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.57■□□□□ 0.4
SSR1P43307 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 AC105339.3-201ENST00000560043 636 ntBASIC17.57■□□□□ 0.4
SSR1P43307 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 AC005593.1-201ENST00000624894 515 ntBASIC17.57■□□□□ 0.4
SSR1P43307 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 TK2-221ENST00000620035 5060 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.57■□□□□ 0.4
SSR1P43307 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSR1P43307 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.57■□□□□ 0.4
SSR1P43307 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
SSR1P43307 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
SSR1P43307 AP002414.3-201ENST00000589352 1468 ntBASIC17.56■□□□□ 0.4
SSR1P43307 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR1P43307 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR1P43307 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR1P43307 AC073621.1-201ENST00000392730 636 ntBASIC17.56■□□□□ 0.4
SSR1P43307 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.56■□□□□ 0.4
SSR1P43307 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SSR1P43307 KRT18P27-201ENST00000427733 1299 ntBASIC17.56■□□□□ 0.4
SSR1P43307 HNRNPDP1-201ENST00000439535 754 ntBASIC17.56■□□□□ 0.4
SSR1P43307 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR1P43307 AL356488.2-201ENST00000602755 427 ntBASIC17.56■□□□□ 0.4
SSR1P43307 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.56■□□□□ 0.4
SSR1P43307 AC008735.5-201ENST00000623544 497 ntBASIC17.56■□□□□ 0.4
SSR1P43307 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.56■□□□□ 0.4
SSR1P43307 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SSR1P43307 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SSR1P43307 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SSR1P43307 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.55■□□□□ 0.4
SSR1P43307 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.55■□□□□ 0.4
SSR1P43307 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.55■□□□□ 0.4
SSR1P43307 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms