Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.31■□□□□ 0.36
GRIK1P39086 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GRIK1P39086 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIK1P39086 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GRIK1P39086 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIK1P39086 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GRIK1P39086 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 LINC01144-201ENST00000626198 1710 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.3■□□□□ 0.36
GRIK1P39086 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 AD000864.1-201ENST00000624076 2295 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 FAM220BP-201ENST00000377689 816 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.3■□□□□ 0.36
GRIK1P39086 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.3■□□□□ 0.36
GRIK1P39086 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.3■□□□□ 0.36
GRIK1P39086 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.3■□□□□ 0.36
GRIK1P39086 AC140878.1-201ENST00000565277 250 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.3■□□□□ 0.36
GRIK1P39086 AC005498.2-205ENST00000593218 784 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 AC011467.4-201ENST00000594891 528 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.3■□□□□ 0.36
GRIK1P39086 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
GRIK1P39086 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GRIK1P39086 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
GRIK1P39086 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
GRIK1P39086 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIK1P39086 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIK1P39086 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 TREML5P-201ENST00000421694 576 ntBASIC17.29■□□□□ 0.36
GRIK1P39086 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIK1P39086 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.29■□□□□ 0.36
GRIK1P39086 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.29■□□□□ 0.36
GRIK1P39086 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIK1P39086 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.29■□□□□ 0.36
GRIK1P39086 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 AC005622.1-201ENST00000636801 1703 ntBASIC17.29■□□□□ 0.36
GRIK1P39086 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
GRIK1P39086 AC009053.2-201ENST00000563701 2365 ntBASIC17.29■□□□□ 0.36
GRIK1P39086 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.29■□□□□ 0.36
GRIK1P39086 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GRIK1P39086 FO538757.1-201ENST00000623083 1397 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GRIK1P39086 FLJ38576-201ENST00000623820 2459 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 AC092171.3-201ENST00000610122 2651 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
GRIK1P39086 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
GRIK1P39086 AL589702.1-201ENST00000641229 1509 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
GRIK1P39086 AL353705.2-201ENST00000428243 662 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 AC055876.3-201ENST00000431496 288 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.28■□□□□ 0.36
GRIK1P39086 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.28■□□□□ 0.36
GRIK1P39086 AC093214.1-201ENST00000511688 1107 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 IGHV3-42-201ENST00000520410 361 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 AC069120.2-201ENST00000524091 540 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.28■□□□□ 0.36
GRIK1P39086 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.28■□□□□ 0.36
GRIK1P39086 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.28■□□□□ 0.36
GRIK1P39086 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 AC138649.4-201ENST00000612222 287 ntBASIC17.28■□□□□ 0.36
GRIK1P39086 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GRIK1P39086 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
GRIK1P39086 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms