Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LINC01144-201ENST00000626198 1710 ntBASIC18.05■□□□□ 0.48
KRT9P35527 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KRT9P35527 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KRT9P35527 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
KRT9P35527 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KRT9P35527 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KRT9P35527 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
KRT9P35527 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
KRT9P35527 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT9P35527 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 PMS2P1-201ENST00000431037 1228 ntBASIC18.04■□□□□ 0.48
KRT9P35527 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.04■□□□□ 0.48
KRT9P35527 POU5F1P6-201ENST00000466990 990 ntBASIC18.04■□□□□ 0.48
KRT9P35527 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 AL160237.2-201ENST00000556165 472 ntBASIC18.04■□□□□ 0.48
KRT9P35527 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT9P35527 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.04■□□□□ 0.48
KRT9P35527 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT9P35527 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.04■□□□□ 0.48
KRT9P35527 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT9P35527 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT9P35527 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC18.04■□□□□ 0.48
KRT9P35527 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
KRT9P35527 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
KRT9P35527 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.03■□□□□ 0.48
KRT9P35527 SLC22A20-204ENST00000530038 1673 ntBASIC18.03■□□□□ 0.48
KRT9P35527 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KRT9P35527 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
KRT9P35527 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 TPM4P1-201ENST00000436100 807 ntBASIC18.03■□□□□ 0.48
KRT9P35527 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.03■□□□□ 0.48
KRT9P35527 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 AP002469.2-201ENST00000531724 424 ntBASIC18.03■□□□□ 0.48
KRT9P35527 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 CYP2A7P1-201ENST00000595391 815 ntBASIC18.03■□□□□ 0.48
KRT9P35527 AL356488.2-201ENST00000602755 427 ntBASIC18.03■□□□□ 0.48
KRT9P35527 AC104692.2-201ENST00000603054 253 ntBASIC18.03■□□□□ 0.48
KRT9P35527 AL773604.1-201ENST00000617417 272 ntBASIC18.03■□□□□ 0.48
KRT9P35527 PGM5P2-202ENST00000637225 1043 ntBASIC18.03■□□□□ 0.48
KRT9P35527 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.03■□□□□ 0.48
KRT9P35527 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.03■□□□□ 0.48
KRT9P35527 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
KRT9P35527 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
KRT9P35527 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.03■□□□□ 0.48
KRT9P35527 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.02■□□□□ 0.48
KRT9P35527 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
KRT9P35527 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.02■□□□□ 0.48
KRT9P35527 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.02■□□□□ 0.48
KRT9P35527 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
KRT9P35527 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.02■□□□□ 0.48
KRT9P35527 AC012640.2-201ENST00000561606 901 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms