Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.91□□□□□ -0.02
GDF1P27539 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GDF1P27539 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.9□□□□□ -0.02
GDF1P27539 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GDF1P27539 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.9□□□□□ -0.02
GDF1P27539 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GDF1P27539 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GDF1P27539 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
GDF1P27539 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
GDF1P27539 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.9□□□□□ -0.02
GDF1P27539 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.9□□□□□ -0.02
GDF1P27539 AC098859.1-201ENST00000502915 1238 ntBASIC14.9□□□□□ -0.02
GDF1P27539 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.9□□□□□ -0.02
GDF1P27539 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.9□□□□□ -0.02
GDF1P27539 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.9□□□□□ -0.02
GDF1P27539 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GDF1P27539 AC022211.2-201ENST00000585075 2527 ntBASIC14.9□□□□□ -0.02
GDF1P27539 AC106886.4-201ENST00000623557 2502 ntBASIC14.9□□□□□ -0.02
GDF1P27539 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.9□□□□□ -0.02
GDF1P27539 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.9□□□□□ -0.02
GDF1P27539 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
GDF1P27539 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 FOXO1B-201ENST00000504678 1527 ntBASIC14.89□□□□□ -0.03
GDF1P27539 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
GDF1P27539 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 IGHV3-42-201ENST00000520410 361 ntBASIC14.89□□□□□ -0.03
GDF1P27539 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.89□□□□□ -0.03
GDF1P27539 DUX4L27-201ENST00000554796 1261 ntBASIC14.89□□□□□ -0.03
GDF1P27539 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 MIR4453-201ENST00000584019 89 ntBASIC14.89□□□□□ -0.03
GDF1P27539 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 AC011467.4-201ENST00000594891 528 ntBASIC14.89□□□□□ -0.03
GDF1P27539 AC018529.1-201ENST00000613063 361 ntBASIC14.89□□□□□ -0.03
GDF1P27539 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.89□□□□□ -0.03
GDF1P27539 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.89□□□□□ -0.03
GDF1P27539 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GDF1P27539 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms