Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 RARRES2P8-201ENST00000566335 367 ntBASIC16.6■□□□□ 0.25
HLA-DPA1P20036 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DPA1P20036 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AC005622.1-201ENST00000636801 1703 ntBASIC16.59■□□□□ 0.25
HLA-DPA1P20036 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HLA-DPA1P20036 U82695.1-201ENST00000635752 1889 ntBASIC16.59■□□□□ 0.25
HLA-DPA1P20036 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 AC006449.6-201ENST00000612330 2296 ntBASIC16.58■□□□□ 0.25
HLA-DPA1P20036 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HLA-DPA1P20036 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HLA-DPA1P20036 FAM58CP-201ENST00000435741 640 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms